Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Gm15039-201ENSMUST00000118914 875 ntBASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Gm44549-201ENSMUST00000208351 577 ntBASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c6Q9D8P7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c6Q9D8P7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Gm2399-201ENSMUST00000104944 225 ntBASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf3c6Q9D8P7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Gm38285-201ENSMUST00000192928 922 ntBASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Rab3c-203ENSMUST00000224180 967 ntBASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf3c6Q9D8P7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Gtf3c6Q9D8P7 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.14■□□□□ 0.66
Gtf3c6Q9D8P7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Gtf3c6Q9D8P7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gtf3c6Q9D8P7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gtf3c6Q9D8P7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gtf3c6Q9D8P7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gtf3c6Q9D8P7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gtf3c6Q9D8P7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gtf3c6Q9D8P7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Gtf3c6Q9D8P7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.14■□□□□ 0.65
Gtf3c6Q9D8P7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.14■□□□□ 0.65
Gtf3c6Q9D8P7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.14■□□□□ 0.65
Gtf3c6Q9D8P7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gtf3c6Q9D8P7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms