Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snx29Q9D3S3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snx29Q9D3S3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snx29Q9D3S3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Snx29Q9D3S3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.83■□□□□ 0.77
Snx29Q9D3S3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snx29Q9D3S3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.83■□□□□ 0.77
Snx29Q9D3S3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snx29Q9D3S3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snx29Q9D3S3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snx29Q9D3S3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx29Q9D3S3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snx29Q9D3S3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Gm10418-201ENSMUST00000100943 576 ntBASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Gm2274-201ENSMUST00000184539 609 ntBASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Gm18032-201ENSMUST00000222541 538 ntBASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx29Q9D3S3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx29Q9D3S3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx29Q9D3S3 Gm10013-201ENSMUST00000106074 672 ntBASIC19.79■□□□□ 0.76
Snx29Q9D3S3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.79■□□□□ 0.76
Snx29Q9D3S3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Snx29Q9D3S3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx29Q9D3S3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.79■□□□□ 0.76
Snx29Q9D3S3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx29Q9D3S3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Gm21362-201ENSMUST00000194272 928 ntBASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.78■□□□□ 0.76
Snx29Q9D3S3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snx29Q9D3S3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Snx29Q9D3S3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Snx29Q9D3S3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Snx29Q9D3S3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snx29Q9D3S3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx29Q9D3S3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.76■□□□□ 0.75
Snx29Q9D3S3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snx29Q9D3S3 Mir5130-201ENSMUST00000175160 84 ntBASIC19.76■□□□□ 0.75
Snx29Q9D3S3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx29Q9D3S3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx29Q9D3S3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms