Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim42Q9D2H5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.96■□□□□ 0.47
Trim42Q9D2H5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim42Q9D2H5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim42Q9D2H5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim42Q9D2H5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Gm11421-201ENSMUST00000122124 294 ntBASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Gm27801-201ENSMUST00000184174 223 ntBASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim42Q9D2H5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim42Q9D2H5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim42Q9D2H5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.92■□□□□ 0.46
Trim42Q9D2H5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim42Q9D2H5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim42Q9D2H5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim42Q9D2H5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim42Q9D2H5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim42Q9D2H5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim42Q9D2H5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms