Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Rpa3Q9CQ71 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rpa3Q9CQ71 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rpa3Q9CQ71 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.02■□□□□ 0.64
Rpa3Q9CQ71 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpa3Q9CQ71 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rpa3Q9CQ71 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpa3Q9CQ71 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpa3Q9CQ71 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpa3Q9CQ71 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.02■□□□□ 0.63
Rpa3Q9CQ71 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpa3Q9CQ71 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rpa3Q9CQ71 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpa3Q9CQ71 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpa3Q9CQ71 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa3Q9CQ71 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa3Q9CQ71 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19■□□□□ 0.63
Rpa3Q9CQ71 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa3Q9CQ71 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Tgds-204ENSMUST00000228543 1594 ntBASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Gm29257-201ENSMUST00000186115 639 ntBASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Grk6-206ENSMUST00000224995 2971 ntBASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rpa3Q9CQ71 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Flg-201ENSMUST00000050758 1488 ntBASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Gm12441-201ENSMUST00000121806 588 ntBASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa3Q9CQ71 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 Gm2559-201ENSMUST00000201323 363 ntBASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa3Q9CQ71 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms