Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.6■□□□□ 0.41
Trim16Q99PP9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim16Q99PP9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.59■□□□□ 0.41
Trim16Q99PP9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim16Q99PP9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trim16Q99PP9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim16Q99PP9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim16Q99PP9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trim16Q99PP9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trim16Q99PP9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.58■□□□□ 0.41
Trim16Q99PP9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.58■□□□□ 0.4
Trim16Q99PP9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim16Q99PP9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim16Q99PP9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim16Q99PP9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim16Q99PP9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim16Q99PP9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim16Q99PP9 BC021767-201ENSMUST00000126387 1716 ntBASIC17.55■□□□□ 0.4
Trim16Q99PP9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.55■□□□□ 0.4
Trim16Q99PP9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Trim16Q99PP9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.55■□□□□ 0.4
Trim16Q99PP9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim16Q99PP9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms