Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC22.24■■□□□ 1.15
Trim34aQ99PP6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim34aQ99PP6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim34aQ99PP6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Gm45906-201ENSMUST00000208911 1430 ntBASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim34aQ99PP6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.22■■□□□ 1.15
Trim34aQ99PP6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC22.22■■□□□ 1.15
Trim34aQ99PP6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim34aQ99PP6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Trim34aQ99PP6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim34aQ99PP6 Gm27463-201ENSMUST00000183569 57 ntBASIC22.21■■□□□ 1.15
Trim34aQ99PP6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC22.21■■□□□ 1.15
Trim34aQ99PP6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trim34aQ99PP6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trim34aQ99PP6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim34aQ99PP6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
Trim34aQ99PP6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Trim34aQ99PP6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Gm6659-201ENSMUST00000174752 547 ntBASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Gm18959-201ENSMUST00000208954 655 ntBASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.2■■□□□ 1.14
Trim34aQ99PP6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34aQ99PP6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.18■■□□□ 1.14
Trim34aQ99PP6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.17■■□□□ 1.14
Trim34aQ99PP6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34aQ99PP6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Trim34aQ99PP6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Trim34aQ99PP6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34aQ99PP6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC22.16■■□□□ 1.14
Trim34aQ99PP6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22.16■■□□□ 1.14
Trim34aQ99PP6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34aQ99PP6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Trim34aQ99PP6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.16■■□□□ 1.14
Trim34aQ99PP6 BC021767-201ENSMUST00000126387 1716 ntBASIC22.16■■□□□ 1.14
Trim34aQ99PP6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.16■■□□□ 1.14
Trim34aQ99PP6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim34aQ99PP6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim34aQ99PP6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim34aQ99PP6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim34aQ99PP6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim34aQ99PP6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.15■■□□□ 1.14
Trim34aQ99PP6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms