Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh15Q99PJ1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh15Q99PJ1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Gm25925-201ENSMUST00000158314 306 ntBASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh15Q99PJ1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Gm24589-201ENSMUST00000116692 94 ntBASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 AW822252-206ENSMUST00000208904 237 ntBASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Gm10566-201ENSMUST00000086739 996 ntBASIC20.59■□□□□ 0.89
Pcdh15Q99PJ1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh15Q99PJ1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh15Q99PJ1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh15Q99PJ1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh15Q99PJ1 Gm24841-201ENSMUST00000158676 357 ntBASIC20.58■□□□□ 0.88
Pcdh15Q99PJ1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pcdh15Q99PJ1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh15Q99PJ1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh15Q99PJ1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh15Q99PJ1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh15Q99PJ1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh15Q99PJ1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh15Q99PJ1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh15Q99PJ1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Gm9731-201ENSMUST00000209480 747 ntBASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Gm7213-201ENSMUST00000215977 950 ntBASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.55■□□□□ 0.88
Pcdh15Q99PJ1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh15Q99PJ1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh15Q99PJ1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh15Q99PJ1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh15Q99PJ1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh15Q99PJ1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh15Q99PJ1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdh15Q99PJ1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.54■□□□□ 0.88
Pcdh15Q99PJ1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Gm11355-201ENSMUST00000121120 306 ntBASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh15Q99PJ1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh15Q99PJ1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh15Q99PJ1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh15Q99PJ1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh15Q99PJ1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms