Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.96■□□□□ 0.63
Usp11Q99K46 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp11Q99K46 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp11Q99K46 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.96■□□□□ 0.63
Usp11Q99K46 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.62
Usp11Q99K46 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp11Q99K46 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp11Q99K46 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.95■□□□□ 0.62
Usp11Q99K46 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp11Q99K46 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Usp11Q99K46 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp11Q99K46 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.95■□□□□ 0.62
Usp11Q99K46 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp11Q99K46 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp11Q99K46 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp11Q99K46 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp11Q99K46 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp11Q99K46 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Usp11Q99K46 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.94■□□□□ 0.62
Usp11Q99K46 Gm12933-201ENSMUST00000120203 872 ntBASIC18.94■□□□□ 0.62
Usp11Q99K46 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.94■□□□□ 0.62
Usp11Q99K46 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.94■□□□□ 0.62
Usp11Q99K46 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Usp11Q99K46 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.94■□□□□ 0.62
Usp11Q99K46 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp11Q99K46 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Usp11Q99K46 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.93■□□□□ 0.62
Usp11Q99K46 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp11Q99K46 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp11Q99K46 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp11Q99K46 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.93■□□□□ 0.62
Usp11Q99K46 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp11Q99K46 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.93■□□□□ 0.62
Usp11Q99K46 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.93■□□□□ 0.62
Usp11Q99K46 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp11Q99K46 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp11Q99K46 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp11Q99K46 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp11Q99K46 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.93■□□□□ 0.62
Usp11Q99K46 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp11Q99K46 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp11Q99K46 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.92■□□□□ 0.62
Usp11Q99K46 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.92■□□□□ 0.62
Usp11Q99K46 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.92■□□□□ 0.62
Usp11Q99K46 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Usp11Q99K46 Gm6365-201ENSMUST00000054711 744 ntBASIC18.92■□□□□ 0.62
Usp11Q99K46 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Usp11Q99K46 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Usp11Q99K46 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp11Q99K46 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp11Q99K46 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp11Q99K46 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp11Q99K46 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Usp11Q99K46 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Usp11Q99K46 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Usp11Q99K46 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp11Q99K46 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp11Q99K46 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
Usp11Q99K46 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp11Q99K46 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp11Q99K46 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp11Q99K46 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp11Q99K46 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp11Q99K46 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp11Q99K46 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp11Q99K46 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp11Q99K46 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp11Q99K46 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp11Q99K46 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.9■□□□□ 0.62
Usp11Q99K46 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp11Q99K46 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp11Q99K46 Gm7290-201ENSMUST00000104990 617 ntBASIC18.9■□□□□ 0.62
Usp11Q99K46 Gm12918-201ENSMUST00000120234 636 ntBASIC18.9■□□□□ 0.62
Usp11Q99K46 Gm15710-201ENSMUST00000121821 636 ntBASIC18.9■□□□□ 0.62
Usp11Q99K46 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp11Q99K46 Gm5075-201ENSMUST00000196916 622 ntBASIC18.9■□□□□ 0.62
Usp11Q99K46 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.9■□□□□ 0.62
Usp11Q99K46 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp11Q99K46 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Usp11Q99K46 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms