Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfc4Q99J62 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfc4Q99J62 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.75■□□□□ 0.91
Rfc4Q99J62 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.75■□□□□ 0.91
Rfc4Q99J62 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfc4Q99J62 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.75■□□□□ 0.91
Rfc4Q99J62 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfc4Q99J62 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.74■□□□□ 0.91
Rfc4Q99J62 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Gm23634-201ENSMUST00000175071 91 ntBASIC20.74■□□□□ 0.91
Rfc4Q99J62 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfc4Q99J62 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.73■□□□□ 0.91
Rfc4Q99J62 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Gm27463-201ENSMUST00000183569 57 ntBASIC20.73■□□□□ 0.91
Rfc4Q99J62 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.73■□□□□ 0.91
Rfc4Q99J62 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rfc4Q99J62 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.72■□□□□ 0.91
Rfc4Q99J62 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rfc4Q99J62 Golph3-205ENSMUST00000228671 2842 ntBASIC20.72■□□□□ 0.91
Rfc4Q99J62 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc4Q99J62 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rfc4Q99J62 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Gm10013-201ENSMUST00000106074 672 ntBASIC20.7■□□□□ 0.9
Rfc4Q99J62 Gm12085-201ENSMUST00000119263 940 ntBASIC20.7■□□□□ 0.9
Rfc4Q99J62 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rfc4Q99J62 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.69■□□□□ 0.9
Rfc4Q99J62 Gm45058-201ENSMUST00000205810 766 ntBASIC20.69■□□□□ 0.9
Rfc4Q99J62 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.69■□□□□ 0.9
Rfc4Q99J62 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms