Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.29■□□□□ 0.36
Pcdhb20Q91XZ9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Golph3-205ENSMUST00000228671 2842 ntBASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Gm12849-201ENSMUST00000120013 739 ntBASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Gm14363-201ENSMUST00000122304 409 ntBASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb20Q91XZ9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb20Q91XZ9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb20Q91XZ9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb20Q91XZ9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb20Q91XZ9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb20Q91XZ9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 AC102523.2-201ENSMUST00000227813 983 ntBASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb20Q91XZ9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb20Q91XZ9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms