Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga4Q91XY4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.69■□□□□ 0.42
Pcdhga4Q91XY4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga4Q91XY4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Gm20049-201ENSMUST00000219950 730 ntBASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga4Q91XY4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga4Q91XY4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Gm44549-201ENSMUST00000208351 577 ntBASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms