Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.71■■□□□ 1.07
StrcQ8VIM6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.71■■□□□ 1.07
StrcQ8VIM6 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.71■■□□□ 1.07
StrcQ8VIM6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
StrcQ8VIM6 Gm10566-201ENSMUST00000086739 996 ntBASIC21.71■■□□□ 1.07
StrcQ8VIM6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
StrcQ8VIM6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
StrcQ8VIM6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
StrcQ8VIM6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
StrcQ8VIM6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
StrcQ8VIM6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
StrcQ8VIM6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
StrcQ8VIM6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
StrcQ8VIM6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Gm24589-201ENSMUST00000116692 94 ntBASIC21.69■■□□□ 1.06
StrcQ8VIM6 Mzt1-203ENSMUST00000227948 952 ntBASIC21.69■■□□□ 1.06
StrcQ8VIM6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
StrcQ8VIM6 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.68■■□□□ 1.06
StrcQ8VIM6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
StrcQ8VIM6 Gm7213-201ENSMUST00000215977 950 ntBASIC21.68■■□□□ 1.06
StrcQ8VIM6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
StrcQ8VIM6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.67■■□□□ 1.06
StrcQ8VIM6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
StrcQ8VIM6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.66■■□□□ 1.06
StrcQ8VIM6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
StrcQ8VIM6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
StrcQ8VIM6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
StrcQ8VIM6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.65■■□□□ 1.06
StrcQ8VIM6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.65■■□□□ 1.06
StrcQ8VIM6 AW822252-206ENSMUST00000208904 237 ntBASIC21.65■■□□□ 1.06
StrcQ8VIM6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
StrcQ8VIM6 Gm18115-201ENSMUST00000221209 621 ntBASIC21.65■■□□□ 1.06
StrcQ8VIM6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
StrcQ8VIM6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
StrcQ8VIM6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
StrcQ8VIM6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
StrcQ8VIM6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
StrcQ8VIM6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
StrcQ8VIM6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
StrcQ8VIM6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
StrcQ8VIM6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
StrcQ8VIM6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
StrcQ8VIM6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
StrcQ8VIM6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.64■■□□□ 1.05
StrcQ8VIM6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
StrcQ8VIM6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
StrcQ8VIM6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
StrcQ8VIM6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
StrcQ8VIM6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
StrcQ8VIM6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
StrcQ8VIM6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
StrcQ8VIM6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.63■■□□□ 1.05
StrcQ8VIM6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
StrcQ8VIM6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
StrcQ8VIM6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
StrcQ8VIM6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.63■■□□□ 1.05
StrcQ8VIM6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms