Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.48■□□□□ 0.07
Cspg4Q8VHY0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cspg4Q8VHY0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Gm27525-201ENSMUST00000184465 107 ntBASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cspg4Q8VHY0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cspg4Q8VHY0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cspg4Q8VHY0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Gm9013-201ENSMUST00000132939 882 ntBASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Gm24589-201ENSMUST00000116692 94 ntBASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Gm12085-201ENSMUST00000119263 940 ntBASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cspg4Q8VHY0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms