Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slc6a20aQ8VDB9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20aQ8VDB9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20aQ8VDB9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20aQ8VDB9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20aQ8VDB9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20aQ8VDB9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20aQ8VDB9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.7■□□□□ 0.42
Slc6a20aQ8VDB9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20aQ8VDB9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20aQ8VDB9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.7■□□□□ 0.42
Slc6a20aQ8VDB9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20aQ8VDB9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.7■□□□□ 0.42
Slc6a20aQ8VDB9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms