Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp33Q8R5K2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Gm10013-201ENSMUST00000106074 672 ntBASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp33Q8R5K2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp33Q8R5K2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp33Q8R5K2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp33Q8R5K2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp33Q8R5K2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.66■□□□□ 0.9
Usp33Q8R5K2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Usp33Q8R5K2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Usp33Q8R5K2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.66■□□□□ 0.9
Usp33Q8R5K2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp33Q8R5K2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Usp33Q8R5K2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Usp33Q8R5K2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp33Q8R5K2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Usp33Q8R5K2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.64■□□□□ 0.89
Usp33Q8R5K2 AA414768-201ENSMUST00000121924 1257 ntBASIC20.64■□□□□ 0.89
Usp33Q8R5K2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp33Q8R5K2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp33Q8R5K2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp33Q8R5K2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp33Q8R5K2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Gm27463-201ENSMUST00000183569 57 ntBASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp33Q8R5K2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Gm27741-201ENSMUST00000185060 237 ntBASIC20.62■□□□□ 0.89
Usp33Q8R5K2 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp33Q8R5K2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms