Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdt1Q8R4E9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdt1Q8R4E9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Gm2559-201ENSMUST00000201323 363 ntBASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cdt1Q8R4E9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.38■□□□□ 0.37
Cdt1Q8R4E9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdt1Q8R4E9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdt1Q8R4E9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms