Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trim29Q8R2Q0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim29Q8R2Q0 Tgds-204ENSMUST00000228543 1594 ntBASIC20.58■□□□□ 0.88
Trim29Q8R2Q0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Trim29Q8R2Q0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim29Q8R2Q0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim29Q8R2Q0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim29Q8R2Q0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim29Q8R2Q0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.57■□□□□ 0.88
Trim29Q8R2Q0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim29Q8R2Q0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim29Q8R2Q0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Trim29Q8R2Q0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Grk6-206ENSMUST00000224995 2971 ntBASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Gm13148-201ENSMUST00000118892 745 ntBASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim29Q8R2Q0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim29Q8R2Q0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim29Q8R2Q0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim29Q8R2Q0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim29Q8R2Q0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim29Q8R2Q0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim29Q8R2Q0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim29Q8R2Q0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim29Q8R2Q0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim29Q8R2Q0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim29Q8R2Q0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim29Q8R2Q0 Fst-202ENSMUST00000223640 2612 ntBASIC20.51■□□□□ 0.87
Trim29Q8R2Q0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim29Q8R2Q0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim29Q8R2Q0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 179 ms