Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Gm20760-201ENSMUST00000179197 648 ntBASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vmn1r28Q8R2C9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vmn1r28Q8R2C9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Mtag2-201ENSMUST00000058665 714 ntBASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Zfp783-201ENSMUST00000095946 670 ntBASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r28Q8R2C9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vmn1r28Q8R2C9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vmn1r28Q8R2C9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Vmn1r28Q8R2C9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Vmn1r28Q8R2C9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vmn1r28Q8R2C9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r28Q8R2C9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r28Q8R2C9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r28Q8R2C9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r28Q8R2C9 Gm38285-201ENSMUST00000192928 922 ntBASIC16.49■□□□□ 0.23
Vmn1r28Q8R2C9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r28Q8R2C9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r28Q8R2C9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r28Q8R2C9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r28Q8R2C9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r28Q8R2C9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms