Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm10517-202ENSMUST00000192970 758 ntBASIC23.07■■□□□ 1.28
Chmp7Q8R1T1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
Chmp7Q8R1T1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23.07■■□□□ 1.28
Chmp7Q8R1T1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chmp7Q8R1T1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chmp7Q8R1T1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC23.07■■□□□ 1.28
Chmp7Q8R1T1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Gm7856-201ENSMUST00000117514 1493 ntBASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Gm12085-201ENSMUST00000119263 940 ntBASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp7Q8R1T1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp7Q8R1T1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp7Q8R1T1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.05■■□□□ 1.28
Chmp7Q8R1T1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp7Q8R1T1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp7Q8R1T1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp7Q8R1T1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC23.05■■□□□ 1.28
Chmp7Q8R1T1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp7Q8R1T1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp7Q8R1T1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chmp7Q8R1T1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chmp7Q8R1T1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chmp7Q8R1T1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chmp7Q8R1T1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chmp7Q8R1T1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Chmp7Q8R1T1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Chmp7Q8R1T1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chmp7Q8R1T1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Chmp7Q8R1T1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC23.03■■□□□ 1.28
Chmp7Q8R1T1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chmp7Q8R1T1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chmp7Q8R1T1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Chmp7Q8R1T1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 BC021767-201ENSMUST00000126387 1716 ntBASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp7Q8R1T1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Chmp7Q8R1T1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Gm27463-201ENSMUST00000183569 57 ntBASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Gm18959-201ENSMUST00000208954 655 ntBASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp7Q8R1T1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp7Q8R1T1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Gm6659-201ENSMUST00000174752 547 ntBASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Chmp7Q8R1T1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Chmp7Q8R1T1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms