Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Treml1Q8K558 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.73■□□□□ 0.43
Treml1Q8K558 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Treml1Q8K558 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Treml1Q8K558 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Treml1Q8K558 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Treml1Q8K558 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.72■□□□□ 0.43
Treml1Q8K558 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Treml1Q8K558 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Treml1Q8K558 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.71■□□□□ 0.43
Treml1Q8K558 Gm11927-201ENSMUST00000118472 759 ntBASIC17.71■□□□□ 0.43
Treml1Q8K558 Trmt13-210ENSMUST00000198454 880 ntBASIC17.71■□□□□ 0.43
Treml1Q8K558 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.71■□□□□ 0.43
Treml1Q8K558 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Treml1Q8K558 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Treml1Q8K558 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.71■□□□□ 0.43
Treml1Q8K558 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Treml1Q8K558 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Treml1Q8K558 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Treml1Q8K558 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Treml1Q8K558 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.7■□□□□ 0.42
Treml1Q8K558 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.7■□□□□ 0.42
Treml1Q8K558 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.7■□□□□ 0.42
Treml1Q8K558 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Treml1Q8K558 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.7■□□□□ 0.42
Treml1Q8K558 Rarb-207ENSMUST00000225921 2756 ntBASIC17.7■□□□□ 0.42
Treml1Q8K558 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.7■□□□□ 0.42
Treml1Q8K558 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Treml1Q8K558 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Treml1Q8K558 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Treml1Q8K558 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Treml1Q8K558 Tgds-204ENSMUST00000228543 1594 ntBASIC17.7■□□□□ 0.42
Treml1Q8K558 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Treml1Q8K558 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.69■□□□□ 0.42
Treml1Q8K558 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Treml1Q8K558 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Treml1Q8K558 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.69■□□□□ 0.42
Treml1Q8K558 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.69■□□□□ 0.42
Treml1Q8K558 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Treml1Q8K558 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Treml1Q8K558 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml1Q8K558 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Treml1Q8K558 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Treml1Q8K558 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Treml1Q8K558 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.68■□□□□ 0.42
Treml1Q8K558 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Flg-201ENSMUST00000050758 1488 ntBASIC17.68■□□□□ 0.42
Treml1Q8K558 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml1Q8K558 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml1Q8K558 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Treml1Q8K558 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Treml1Q8K558 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml1Q8K558 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.67■□□□□ 0.42
Treml1Q8K558 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.67■□□□□ 0.42
Treml1Q8K558 Zfp783-201ENSMUST00000095946 670 ntBASIC17.67■□□□□ 0.42
Treml1Q8K558 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml1Q8K558 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml1Q8K558 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml1Q8K558 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Treml1Q8K558 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml1Q8K558 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Treml1Q8K558 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Treml1Q8K558 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms