Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zc3h3Q8CHP0 Gm7791-201ENSMUST00000219066 539 ntBASIC17.67■□□□□ 0.42
Zc3h3Q8CHP0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Zc3h3Q8CHP0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Zc3h3Q8CHP0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zc3h3Q8CHP0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Zc3h3Q8CHP0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zc3h3Q8CHP0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zc3h3Q8CHP0 Gm5864-201ENSMUST00000202263 970 ntBASIC17.66■□□□□ 0.42
Zc3h3Q8CHP0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Zc3h3Q8CHP0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.66■□□□□ 0.42
Zc3h3Q8CHP0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zc3h3Q8CHP0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zc3h3Q8CHP0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Gm7638-201ENSMUST00000121348 967 ntBASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Gm34391-201ENSMUST00000203706 907 ntBASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Zc3h3Q8CHP0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Zc3h3Q8CHP0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Gm27742-201ENSMUST00000184667 60 ntBASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zc3h3Q8CHP0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 Gm7213-201ENSMUST00000215977 950 ntBASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zc3h3Q8CHP0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zc3h3Q8CHP0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Birc2-201ENSMUST00000054878 378 ntBASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zc3h3Q8CHP0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Zc3h3Q8CHP0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zc3h3Q8CHP0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Zc3h3Q8CHP0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Zc3h3Q8CHP0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms