Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nup88Q8CEC0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nup88Q8CEC0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nup88Q8CEC0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nup88Q8CEC0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.2■□□□□ 0.98
Nup88Q8CEC0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Nup88Q8CEC0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Gm10252-201ENSMUST00000209541 832 ntBASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup88Q8CEC0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Nup88Q8CEC0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Trmt13-210ENSMUST00000198454 880 ntBASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Nup88Q8CEC0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup88Q8CEC0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup88Q8CEC0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup88Q8CEC0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nup88Q8CEC0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup88Q8CEC0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup88Q8CEC0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.15■□□□□ 0.98
Nup88Q8CEC0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.15■□□□□ 0.98
Nup88Q8CEC0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms