Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm9949Q8C9F4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm9949Q8C9F4 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.2□□□□□ -0.14
Gm9949Q8C9F4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm9949Q8C9F4 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.2□□□□□ -0.14
Gm9949Q8C9F4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm9949Q8C9F4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm9949Q8C9F4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm9949Q8C9F4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Gm12933-201ENSMUST00000120203 872 ntBASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Gm5408-201ENSMUST00000197998 747 ntBASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm9949Q8C9F4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Rab3c-203ENSMUST00000224180 967 ntBASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm9949Q8C9F4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Gm44549-201ENSMUST00000208351 577 ntBASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.16□□□□□ -0.14
Gm9949Q8C9F4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Gm2399-201ENSMUST00000104944 225 ntBASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.15□□□□□ -0.14
Gm9949Q8C9F4 Gm10602-201ENSMUST00000098239 609 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms