Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp44Q8C2S0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.12■□□□□ 0.97
Usp44Q8C2S0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp44Q8C2S0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp44Q8C2S0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Idnk-204ENSMUST00000226010 1898 ntBASIC21.1■□□□□ 0.97
Usp44Q8C2S0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Rarb-207ENSMUST00000225921 2756 ntBASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp44Q8C2S0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Gm10138-203ENSMUST00000206952 366 ntBASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp44Q8C2S0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp44Q8C2S0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Usp44Q8C2S0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.08■□□□□ 0.97
Usp44Q8C2S0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp44Q8C2S0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp44Q8C2S0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Usp44Q8C2S0 Gm10653-202ENSMUST00000139570 835 ntBASIC21.08■□□□□ 0.97
Usp44Q8C2S0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp44Q8C2S0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp44Q8C2S0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp44Q8C2S0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp44Q8C2S0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp44Q8C2S0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp44Q8C2S0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp44Q8C2S0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp44Q8C2S0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp44Q8C2S0 Trmt13-210ENSMUST00000198454 880 ntBASIC21.07■□□□□ 0.96
Usp44Q8C2S0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp44Q8C2S0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp44Q8C2S0 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.07■□□□□ 0.96
Usp44Q8C2S0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp44Q8C2S0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms