Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scfd1Q8BRF7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scfd1Q8BRF7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Gm3375-201ENSMUST00000203929 796 ntBASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scfd1Q8BRF7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Gm43799-201ENSMUST00000201845 579 ntBASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Gm30025-201ENSMUST00000218555 728 ntBASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scfd1Q8BRF7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scfd1Q8BRF7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scfd1Q8BRF7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scfd1Q8BRF7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scfd1Q8BRF7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Scfd1Q8BRF7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scfd1Q8BRF7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Gm7977-201ENSMUST00000193787 748 ntBASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Scfd1Q8BRF7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Gm6433-201ENSMUST00000118634 875 ntBASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Gm9987-201ENSMUST00000069768 567 ntBASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scfd1Q8BRF7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Scfd1Q8BRF7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms