Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcal1Q8BJL0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcal1Q8BJL0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Gm18959-201ENSMUST00000208954 655 ntBASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Smarcal1Q8BJL0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcal1Q8BJL0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Gm10517-202ENSMUST00000192970 758 ntBASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smarcal1Q8BJL0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Gm45058-201ENSMUST00000205810 766 ntBASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcal1Q8BJL0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcal1Q8BJL0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.1■□□□□ 0.65
Smarcal1Q8BJL0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcal1Q8BJL0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.1■□□□□ 0.65
Smarcal1Q8BJL0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.1■□□□□ 0.65
Smarcal1Q8BJL0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Smarcal1Q8BJL0 Gm38027-201ENSMUST00000192315 235 ntBASIC19.1■□□□□ 0.65
Smarcal1Q8BJL0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms