Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trnp1Q80ZI1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Trnp1Q80ZI1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Gm7638-201ENSMUST00000121348 967 ntBASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Gm17807-201ENSMUST00000186869 298 ntBASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Gm29518-201ENSMUST00000190858 372 ntBASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Gm7791-201ENSMUST00000219066 539 ntBASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Gm7461-201ENSMUST00000058918 827 ntBASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnp1Q80ZI1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Trnp1Q80ZI1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trnp1Q80ZI1 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.39■□□□□ 0.86
Trnp1Q80ZI1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trnp1Q80ZI1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Trnp1Q80ZI1 Mir1668-201ENSMUST00000184114 107 ntBASIC20.39■□□□□ 0.85
Trnp1Q80ZI1 Gm7370-201ENSMUST00000219471 767 ntBASIC20.39■□□□□ 0.85
Trnp1Q80ZI1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trnp1Q80ZI1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trnp1Q80ZI1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trnp1Q80ZI1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
Trnp1Q80ZI1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trnp1Q80ZI1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trnp1Q80ZI1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnp1Q80ZI1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Gm18669-201ENSMUST00000216049 778 ntBASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnp1Q80ZI1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Gm7153-201ENSMUST00000117092 455 ntBASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trnp1Q80ZI1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trnp1Q80ZI1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms