Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Usp6nlQ80XC3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp6nlQ80XC3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.89■□□□□ 0.77
Usp6nlQ80XC3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp6nlQ80XC3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp6nlQ80XC3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp6nlQ80XC3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp6nlQ80XC3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.89■□□□□ 0.77
Usp6nlQ80XC3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp6nlQ80XC3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp6nlQ80XC3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp6nlQ80XC3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.88■□□□□ 0.77
Usp6nlQ80XC3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.88■□□□□ 0.77
Usp6nlQ80XC3 Gm18959-201ENSMUST00000208954 655 ntBASIC19.88■□□□□ 0.77
Usp6nlQ80XC3 Gm10819-201ENSMUST00000099988 561 ntBASIC19.88■□□□□ 0.77
Usp6nlQ80XC3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp6nlQ80XC3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp6nlQ80XC3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp6nlQ80XC3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp6nlQ80XC3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp6nlQ80XC3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp6nlQ80XC3 Gm12085-201ENSMUST00000119263 940 ntBASIC19.86■□□□□ 0.77
Usp6nlQ80XC3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp6nlQ80XC3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp6nlQ80XC3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.86■□□□□ 0.77
Usp6nlQ80XC3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp6nlQ80XC3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp6nlQ80XC3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Gm10517-202ENSMUST00000192970 758 ntBASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Gm18032-201ENSMUST00000222541 538 ntBASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Usp6nlQ80XC3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp6nlQ80XC3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Gm27463-201ENSMUST00000183569 57 ntBASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Gm45058-201ENSMUST00000205810 766 ntBASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp6nlQ80XC3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.83■□□□□ 0.76
Usp6nlQ80XC3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp6nlQ80XC3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp6nlQ80XC3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Gm38027-201ENSMUST00000192315 235 ntBASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp6nlQ80XC3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp6nlQ80XC3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp6nlQ80XC3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp6nlQ80XC3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp6nlQ80XC3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp6nlQ80XC3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms