Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc116Q80X53 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ccdc116Q80X53 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc116Q80X53 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc116Q80X53 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc116Q80X53 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc116Q80X53 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Gm27405-201ENSMUST00000184201 112 ntBASIC17.6■□□□□ 0.41
Ccdc116Q80X53 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc116Q80X53 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc116Q80X53 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Gm7290-201ENSMUST00000104990 617 ntBASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Gm12918-201ENSMUST00000120234 636 ntBASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Gm15710-201ENSMUST00000121821 636 ntBASIC17.58■□□□□ 0.4
Ccdc116Q80X53 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Gm5075-201ENSMUST00000196916 622 ntBASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc116Q80X53 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc116Q80X53 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc116Q80X53 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Idnk-204ENSMUST00000226010 1898 ntBASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Gm26524-201ENSMUST00000192339 390 ntBASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc116Q80X53 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms