Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Gm30025-201ENSMUST00000218555 728 ntBASIC17.15■□□□□ 0.34
Vrk1Q80X41 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.15■□□□□ 0.34
Vrk1Q80X41 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vrk1Q80X41 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.15■□□□□ 0.34
Vrk1Q80X41 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Vrk1Q80X41 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vrk1Q80X41 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vrk1Q80X41 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Mir6349-201ENSMUST00000184059 97 ntBASIC17.14■□□□□ 0.33
Vrk1Q80X41 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vrk1Q80X41 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Gm10231-201ENSMUST00000181584 441 ntBASIC17.13■□□□□ 0.33
Vrk1Q80X41 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Gm10175-202ENSMUST00000208752 441 ntBASIC17.13■□□□□ 0.33
Vrk1Q80X41 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vrk1Q80X41 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Vrk1Q80X41 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vrk1Q80X41 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vrk1Q80X41 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vrk1Q80X41 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.12■□□□□ 0.33
Vrk1Q80X41 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vrk1Q80X41 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.12■□□□□ 0.33
Vrk1Q80X41 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vrk1Q80X41 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Gm12382-201ENSMUST00000122005 922 ntBASIC17.11■□□□□ 0.33
Vrk1Q80X41 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Odf3b-204ENSMUST00000227834 930 ntBASIC17.11■□□□□ 0.33
Vrk1Q80X41 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.11■□□□□ 0.33
Vrk1Q80X41 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vrk1Q80X41 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Timm23-208ENSMUST00000226683 750 ntBASIC17.1■□□□□ 0.33
Vrk1Q80X41 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vrk1Q80X41 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms