Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh8Q7TSK3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh8Q7TSK3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Rarb-207ENSMUST00000225921 2756 ntBASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdh8Q7TSK3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Mtag2-201ENSMUST00000058665 714 ntBASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh8Q7TSK3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Gm715-201ENSMUST00000117865 831 ntBASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Zfp783-201ENSMUST00000095946 670 ntBASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms