Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Gm11249-201ENSMUST00000117071 859 ntBASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Exosc3Q7TQK4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Gm37856-201ENSMUST00000191634 999 ntBASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Exosc3Q7TQK4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Exosc3Q7TQK4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Exosc3Q7TQK4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Exosc3Q7TQK4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Exosc3Q7TQK4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Exosc3Q7TQK4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.52■□□□□ 0.24
Exosc3Q7TQK4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Exosc3Q7TQK4 Trmt13-210ENSMUST00000198454 880 ntBASIC16.52■□□□□ 0.24
Exosc3Q7TQK4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Exosc3Q7TQK4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Exosc3Q7TQK4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Exosc3Q7TQK4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Exosc3Q7TQK4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Exosc3Q7TQK4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Exosc3Q7TQK4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Exosc3Q7TQK4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Exosc3Q7TQK4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms