Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.27■□□□□ 0.67
Rnf139Q7TMV1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rnf139Q7TMV1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf139Q7TMV1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Grk6-206ENSMUST00000224995 2971 ntBASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Trmt13-210ENSMUST00000198454 880 ntBASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf139Q7TMV1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf139Q7TMV1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf139Q7TMV1 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.23■□□□□ 0.67
Rnf139Q7TMV1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf139Q7TMV1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rnf139Q7TMV1 Gm10653-202ENSMUST00000139570 835 ntBASIC19.23■□□□□ 0.67
Rnf139Q7TMV1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.23■□□□□ 0.67
Rnf139Q7TMV1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf139Q7TMV1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf139Q7TMV1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf139Q7TMV1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf139Q7TMV1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf139Q7TMV1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms