Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 Gm12922-201ENSMUST00000120626 809 ntBASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 Gm14117-201ENSMUST00000122417 843 ntBASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 Gm43137-201ENSMUST00000198052 594 ntBASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TwistnbQ78WZ7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Gm11421-201ENSMUST00000122124 294 ntBASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TwistnbQ78WZ7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TwistnbQ78WZ7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TwistnbQ78WZ7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TwistnbQ78WZ7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TwistnbQ78WZ7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TwistnbQ78WZ7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TwistnbQ78WZ7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.33■□□□□ 0.52
TwistnbQ78WZ7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.32■□□□□ 0.52
TwistnbQ78WZ7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Gm45102-201ENSMUST00000207427 857 ntBASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TwistnbQ78WZ7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms