Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.93■■□□□ 1.1
Sned1Q70E20 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Sned1Q70E20 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sned1Q70E20 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sned1Q70E20 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sned1Q70E20 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sned1Q70E20 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sned1Q70E20 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sned1Q70E20 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sned1Q70E20 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sned1Q70E20 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sned1Q70E20 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Sned1Q70E20 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sned1Q70E20 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Sned1Q70E20 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.92■■□□□ 1.1
Sned1Q70E20 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sned1Q70E20 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Sned1Q70E20 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Gm13401-201ENSMUST00000117074 291 ntBASIC21.91■■□□□ 1.1
Sned1Q70E20 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.91■■□□□ 1.1
Sned1Q70E20 Gm27742-201ENSMUST00000184667 60 ntBASIC21.91■■□□□ 1.1
Sned1Q70E20 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Sned1Q70E20 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.91■■□□□ 1.1
Sned1Q70E20 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sned1Q70E20 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Sned1Q70E20 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.9■■□□□ 1.1
Sned1Q70E20 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.9■■□□□ 1.1
Sned1Q70E20 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.9■■□□□ 1.1
Sned1Q70E20 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Sned1Q70E20 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sned1Q70E20 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.89■■□□□ 1.1
Sned1Q70E20 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.89■■□□□ 1.1
Sned1Q70E20 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sned1Q70E20 Il3ra-202ENSMUST00000223589 738 ntBASIC21.89■■□□□ 1.1
Sned1Q70E20 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
Sned1Q70E20 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.89■■□□□ 1.09
Sned1Q70E20 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sned1Q70E20 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.89■■□□□ 1.09
Sned1Q70E20 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sned1Q70E20 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Sned1Q70E20 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Sned1Q70E20 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.88■■□□□ 1.09
Sned1Q70E20 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.88■■□□□ 1.09
Sned1Q70E20 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sned1Q70E20 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Sned1Q70E20 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.88■■□□□ 1.09
Sned1Q70E20 Gm9731-201ENSMUST00000209480 747 ntBASIC21.88■■□□□ 1.09
Sned1Q70E20 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
Sned1Q70E20 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sned1Q70E20 Gm10566-201ENSMUST00000086739 996 ntBASIC21.88■■□□□ 1.09
Sned1Q70E20 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sned1Q70E20 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sned1Q70E20 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sned1Q70E20 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Sned1Q70E20 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Sned1Q70E20 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sned1Q70E20 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.87■■□□□ 1.09
Sned1Q70E20 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sned1Q70E20 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.87■■□□□ 1.09
Sned1Q70E20 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sned1Q70E20 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sned1Q70E20 Gm6443-201ENSMUST00000203599 874 ntBASIC21.87■■□□□ 1.09
Sned1Q70E20 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.87■■□□□ 1.09
Sned1Q70E20 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.87■■□□□ 1.09
Sned1Q70E20 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sned1Q70E20 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.87■■□□□ 1.09
Sned1Q70E20 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Sned1Q70E20 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Sned1Q70E20 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.86■■□□□ 1.09
Sned1Q70E20 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sned1Q70E20 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.86■■□□□ 1.09
Sned1Q70E20 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sned1Q70E20 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sned1Q70E20 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sned1Q70E20 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sned1Q70E20 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sned1Q70E20 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Sned1Q70E20 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Sned1Q70E20 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Sned1Q70E20 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms