Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Six3Q62233 Gm26571-201ENSMUST00000181399 666 ntBASIC17.58■□□□□ 0.4
Six3Q62233 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.58■□□□□ 0.4
Six3Q62233 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six3Q62233 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six3Q62233 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six3Q62233 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six3Q62233 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six3Q62233 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six3Q62233 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six3Q62233 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Six3Q62233 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six3Q62233 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six3Q62233 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six3Q62233 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Six3Q62233 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six3Q62233 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Six3Q62233 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.57■□□□□ 0.4
Six3Q62233 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six3Q62233 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six3Q62233 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Six3Q62233 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Six3Q62233 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six3Q62233 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Six3Q62233 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.56■□□□□ 0.4
Six3Q62233 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Six3Q62233 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.56■□□□□ 0.4
Six3Q62233 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Six3Q62233 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Six3Q62233 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six3Q62233 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Six3Q62233 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.55■□□□□ 0.4
Six3Q62233 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six3Q62233 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Six3Q62233 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six3Q62233 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six3Q62233 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Six3Q62233 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six3Q62233 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six3Q62233 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Six3Q62233 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six3Q62233 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.54■□□□□ 0.4
Six3Q62233 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six3Q62233 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.54■□□□□ 0.4
Six3Q62233 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.54■□□□□ 0.4
Six3Q62233 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six3Q62233 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.54■□□□□ 0.4
Six3Q62233 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six3Q62233 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.53■□□□□ 0.4
Six3Q62233 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.53■□□□□ 0.4
Six3Q62233 Gm18284-201ENSMUST00000172604 624 ntBASIC17.53■□□□□ 0.4
Six3Q62233 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Six3Q62233 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six3Q62233 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six3Q62233 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six3Q62233 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six3Q62233 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Six3Q62233 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Six3Q62233 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six3Q62233 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.52■□□□□ 0.4
Six3Q62233 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six3Q62233 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Six3Q62233 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six3Q62233 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six3Q62233 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six3Q62233 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six3Q62233 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms