Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.18□□□□□ -0.3
Foxc1Q61572 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Foxc1Q61572 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Foxc1Q61572 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Foxc1Q61572 Gm22240-201ENSMUST00000175225 82 ntBASIC13.18□□□□□ -0.3
Foxc1Q61572 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.18□□□□□ -0.3
Foxc1Q61572 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Foxc1Q61572 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxc1Q61572 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.17□□□□□ -0.3
Foxc1Q61572 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Foxc1Q61572 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.17□□□□□ -0.3
Foxc1Q61572 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Foxc1Q61572 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Foxc1Q61572 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.17□□□□□ -0.3
Foxc1Q61572 Gm8520-201ENSMUST00000186517 868 ntBASIC13.17□□□□□ -0.3
Foxc1Q61572 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.17□□□□□ -0.3
Foxc1Q61572 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxc1Q61572 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Foxc1Q61572 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Gm13148-201ENSMUST00000118892 745 ntBASIC13.16□□□□□ -0.3
Foxc1Q61572 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Foxc1Q61572 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxc1Q61572 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.15□□□□□ -0.3
Foxc1Q61572 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.15□□□□□ -0.3
Foxc1Q61572 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.15□□□□□ -0.3
Foxc1Q61572 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Foxc1Q61572 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.15□□□□□ -0.3
Foxc1Q61572 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.15□□□□□ -0.3
Foxc1Q61572 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Foxc1Q61572 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Foxc1Q61572 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Foxc1Q61572 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Foxc1Q61572 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Foxc1Q61572 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Foxc1Q61572 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxc1Q61572 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Foxc1Q61572 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Foxc1Q61572 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.14□□□□□ -0.31
Foxc1Q61572 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms