Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim25Q61510 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim25Q61510 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim25Q61510 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.5■□□□□ 0.71
Trim25Q61510 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim25Q61510 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim25Q61510 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim25Q61510 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim25Q61510 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim25Q61510 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Trim25Q61510 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim25Q61510 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Trim25Q61510 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim25Q61510 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Trim25Q61510 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
Trim25Q61510 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim25Q61510 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.49■□□□□ 0.71
Trim25Q61510 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim25Q61510 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.48■□□□□ 0.71
Trim25Q61510 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim25Q61510 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim25Q61510 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim25Q61510 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim25Q61510 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim25Q61510 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Trim25Q61510 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim25Q61510 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.47■□□□□ 0.71
Trim25Q61510 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim25Q61510 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim25Q61510 Golgb1-201ENSMUST00000023534 498 ntBASIC19.47■□□□□ 0.71
Trim25Q61510 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim25Q61510 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim25Q61510 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim25Q61510 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim25Q61510 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim25Q61510 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim25Q61510 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim25Q61510 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim25Q61510 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim25Q61510 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.46■□□□□ 0.71
Trim25Q61510 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim25Q61510 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim25Q61510 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim25Q61510 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim25Q61510 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim25Q61510 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.45■□□□□ 0.7
Trim25Q61510 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim25Q61510 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim25Q61510 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim25Q61510 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim25Q61510 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim25Q61510 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim25Q61510 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms