Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm18025-201ENSMUST00000221733 862 ntBASIC18.76■□□□□ 0.59
Smarcd1Q61466 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.75■□□□□ 0.59
Smarcd1Q61466 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.75■□□□□ 0.59
Smarcd1Q61466 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd1Q61466 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.74■□□□□ 0.59
Smarcd1Q61466 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smarcd1Q61466 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Gm42545-201ENSMUST00000202755 922 ntBASIC18.73■□□□□ 0.59
Smarcd1Q61466 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd1Q61466 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.72■□□□□ 0.59
Smarcd1Q61466 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.72■□□□□ 0.59
Smarcd1Q61466 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.72■□□□□ 0.59
Smarcd1Q61466 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd1Q61466 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smarcd1Q61466 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.71■□□□□ 0.59
Smarcd1Q61466 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.71■□□□□ 0.59
Smarcd1Q61466 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Gm6576-201ENSMUST00000169678 883 ntBASIC18.71■□□□□ 0.59
Smarcd1Q61466 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd1Q61466 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd1Q61466 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.71■□□□□ 0.58
Smarcd1Q61466 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Smarcd1Q61466 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Gm43183-201ENSMUST00000200632 547 ntBASIC18.7■□□□□ 0.58
Smarcd1Q61466 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd1Q61466 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd1Q61466 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.69■□□□□ 0.58
Smarcd1Q61466 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms