Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ift88Q61371 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.93■□□□□ 0.78
Ift88Q61371 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ift88Q61371 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.93■□□□□ 0.78
Ift88Q61371 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ift88Q61371 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ift88Q61371 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ift88Q61371 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ift88Q61371 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.93■□□□□ 0.78
Ift88Q61371 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ift88Q61371 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.93■□□□□ 0.78
Ift88Q61371 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
Ift88Q61371 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Ift88Q61371 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ift88Q61371 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ift88Q61371 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.92■□□□□ 0.78
Ift88Q61371 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Ift88Q61371 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.92■□□□□ 0.78
Ift88Q61371 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Gm22325-201ENSMUST00000158904 308 ntBASIC19.92■□□□□ 0.78
Ift88Q61371 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ift88Q61371 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ift88Q61371 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ift88Q61371 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ift88Q61371 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.91■□□□□ 0.78
Ift88Q61371 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ift88Q61371 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ift88Q61371 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ift88Q61371 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ift88Q61371 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ift88Q61371 Gm8969-201ENSMUST00000199694 526 ntBASIC19.91■□□□□ 0.78
Ift88Q61371 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ift88Q61371 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ift88Q61371 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.91■□□□□ 0.78
Ift88Q61371 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ift88Q61371 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ift88Q61371 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ift88Q61371 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ift88Q61371 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ift88Q61371 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ift88Q61371 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.9■□□□□ 0.78
Ift88Q61371 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ift88Q61371 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ift88Q61371 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Ift88Q61371 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ift88Q61371 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ift88Q61371 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ift88Q61371 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.89■□□□□ 0.77
Ift88Q61371 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ift88Q61371 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ift88Q61371 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ift88Q61371 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ift88Q61371 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.89■□□□□ 0.77
Ift88Q61371 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ift88Q61371 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ift88Q61371 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ift88Q61371 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.88■□□□□ 0.77
Ift88Q61371 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.88■□□□□ 0.77
Ift88Q61371 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ift88Q61371 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ift88Q61371 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.87■□□□□ 0.77
Ift88Q61371 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms