Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch1Q61115 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch1Q61115 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch1Q61115 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch1Q61115 Spr-ps1-201ENSMUST00000089584 605 ntBASIC26.16■■□□□ 1.78
Ptch1Q61115 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch1Q61115 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch1Q61115 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch1Q61115 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ptch1Q61115 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Ptch1Q61115 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC26.15■■□□□ 1.78
Ptch1Q61115 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ptch1Q61115 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ptch1Q61115 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ptch1Q61115 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ptch1Q61115 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ptch1Q61115 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ptch1Q61115 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ptch1Q61115 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ptch1Q61115 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC26.14■■□□□ 1.78
Ptch1Q61115 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ptch1Q61115 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ptch1Q61115 AW822252-206ENSMUST00000208904 237 ntBASIC26.14■■□□□ 1.78
Ptch1Q61115 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ptch1Q61115 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ptch1Q61115 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ptch1Q61115 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ptch1Q61115 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ptch1Q61115 Gm13401-201ENSMUST00000117074 291 ntBASIC26.14■■□□□ 1.77
Ptch1Q61115 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC26.14■■□□□ 1.77
Ptch1Q61115 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC26.14■■□□□ 1.77
Ptch1Q61115 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Ptch1Q61115 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptch1Q61115 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptch1Q61115 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Ptch1Q61115 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC26.13■■□□□ 1.77
Ptch1Q61115 Gm37820-201ENSMUST00000194021 2147 ntBASIC26.13■■□□□ 1.77
Ptch1Q61115 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ptch1Q61115 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ptch1Q61115 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptch1Q61115 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptch1Q61115 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptch1Q61115 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC26.12■■□□□ 1.77
Ptch1Q61115 Gm15853-202ENSMUST00000195518 2041 ntBASIC26.12■■□□□ 1.77
Ptch1Q61115 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ptch1Q61115 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC26.11■■□□□ 1.77
Ptch1Q61115 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch1Q61115 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Ptch1Q61115 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Ptch1Q61115 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch1Q61115 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch1Q61115 Gm43514-201ENSMUST00000198852 424 ntBASIC26.11■■□□□ 1.77
Ptch1Q61115 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch1Q61115 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch1Q61115 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch1Q61115 Gm34220-201ENSMUST00000223001 2709 ntBASIC26.11■■□□□ 1.77
Ptch1Q61115 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch1Q61115 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch1Q61115 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC26.1■■□□□ 1.77
Ptch1Q61115 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ptch1Q61115 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ptch1Q61115 Gm11355-201ENSMUST00000121120 306 ntBASIC26.1■■□□□ 1.77
Ptch1Q61115 Gm3272-201ENSMUST00000181181 1229 ntBASIC26.1■■□□□ 1.77
Ptch1Q61115 Gm10566-201ENSMUST00000086739 996 ntBASIC26.1■■□□□ 1.77
Ptch1Q61115 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Ptch1Q61115 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ptch1Q61115 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ptch1Q61115 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ptch1Q61115 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
Ptch1Q61115 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC26.09■■□□□ 1.77
Ptch1Q61115 AC164629.2-201ENSMUST00000217916 270 ntBASIC26.09■■□□□ 1.77
Ptch1Q61115 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ptch1Q61115 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ptch1Q61115 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ptch1Q61115 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ptch1Q61115 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch1Q61115 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch1Q61115 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
Ptch1Q61115 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC26.08■■□□□ 1.77
Ptch1Q61115 Gm27742-201ENSMUST00000184667 60 ntBASIC26.08■■□□□ 1.77
Ptch1Q61115 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC26.08■■□□□ 1.77
Ptch1Q61115 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch1Q61115 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch1Q61115 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch1Q61115 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Ptch1Q61115 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch1Q61115 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch1Q61115 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch1Q61115 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch1Q61115 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
Ptch1Q61115 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC26.07■■□□□ 1.76
Ptch1Q61115 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Ptch1Q61115 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ptch1Q61115 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Ptch1Q61115 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC26.07■■□□□ 1.76
Ptch1Q61115 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch1Q61115 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch1Q61115 Gm11860-201ENSMUST00000122346 1010 ntBASIC26.06■■□□□ 1.76
Ptch1Q61115 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC26.06■■□□□ 1.76
Ptch1Q61115 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms