Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a4Q60857 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Slc6a4Q60857 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a4Q60857 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a4Q60857 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.42■□□□□ 0.54
Slc6a4Q60857 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a4Q60857 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a4Q60857 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a4Q60857 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a4Q60857 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.41■□□□□ 0.54
Slc6a4Q60857 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Slc6a4Q60857 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a4Q60857 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a4Q60857 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a4Q60857 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a4Q60857 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a4Q60857 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a4Q60857 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a4Q60857 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc6a4Q60857 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a4Q60857 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Slc6a4Q60857 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a4Q60857 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a4Q60857 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a4Q60857 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Mir5122-201ENSMUST00000175004 89 ntBASIC18.39■□□□□ 0.53
Slc6a4Q60857 Gm37055-201ENSMUST00000191866 133 ntBASIC18.39■□□□□ 0.53
Slc6a4Q60857 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.39■□□□□ 0.53
Slc6a4Q60857 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a4Q60857 Fst-202ENSMUST00000223640 2612 ntBASIC18.38■□□□□ 0.53
Slc6a4Q60857 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Gm12382-201ENSMUST00000122005 922 ntBASIC18.38■□□□□ 0.53
Slc6a4Q60857 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms