Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav7d-4Q5R1H9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav7d-4Q5R1H9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav7d-4Q5R1H9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-4Q5R1H9 Haglr-201ENSMUST00000100000 2085 ntBASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Tgds-204ENSMUST00000228543 1594 ntBASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms