Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Mir8098-201ENSMUST00000184011 137 ntBASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Gm27459-201ENSMUST00000184860 107 ntBASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Gm37722-201ENSMUST00000193757 208 ntBASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col27a1Q5QNQ9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col27a1Q5QNQ9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col27a1Q5QNQ9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Gm27742-201ENSMUST00000184667 60 ntBASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Il3ra-202ENSMUST00000223589 738 ntBASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Birc2-201ENSMUST00000054878 378 ntBASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col27a1Q5QNQ9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Gm13884-201ENSMUST00000118103 829 ntBASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Gm18733-201ENSMUST00000173950 856 ntBASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col27a1Q5QNQ9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms