Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Trim41Q5NCC3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Trim41Q5NCC3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Trim41Q5NCC3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Trim41Q5NCC3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Trim41Q5NCC3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC31.31■■■□□ 2.6
Trim41Q5NCC3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Trim41Q5NCC3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trim41Q5NCC3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Trim41Q5NCC3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trim41Q5NCC3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC31.3■■■□□ 2.6
Trim41Q5NCC3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC31.3■■■□□ 2.6
Trim41Q5NCC3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trim41Q5NCC3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trim41Q5NCC3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC31.3■■■□□ 2.6
Trim41Q5NCC3 BC021767-201ENSMUST00000126387 1716 ntBASIC31.29■■■□□ 2.6
Trim41Q5NCC3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Trim41Q5NCC3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC31.29■■■□□ 2.6
Trim41Q5NCC3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Trim41Q5NCC3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC31.29■■■□□ 2.6
Trim41Q5NCC3 Mir2861-201ENSMUST00000175539 82 ntBASIC31.29■■■□□ 2.6
Trim41Q5NCC3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Trim41Q5NCC3 Gm9194-201ENSMUST00000220749 1447 ntBASIC31.29■■■□□ 2.6
Trim41Q5NCC3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Trim41Q5NCC3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Timm23-208ENSMUST00000226683 750 ntBASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Trim41Q5NCC3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trim41Q5NCC3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
Trim41Q5NCC3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Trim41Q5NCC3 Gm45906-201ENSMUST00000208911 1430 ntBASIC31.27■■■□□ 2.6
Trim41Q5NCC3 Gm7153-201ENSMUST00000117092 455 ntBASIC31.27■■■□□ 2.6
Trim41Q5NCC3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trim41Q5NCC3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trim41Q5NCC3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trim41Q5NCC3 Gm38345-201ENSMUST00000192635 1748 ntBASIC31.27■■■□□ 2.6
Trim41Q5NCC3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Trim41Q5NCC3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Trim41Q5NCC3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Trim41Q5NCC3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Trim41Q5NCC3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC31.26■■■□□ 2.59
Trim41Q5NCC3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Trim41Q5NCC3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Trim41Q5NCC3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Trim41Q5NCC3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Trim41Q5NCC3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC31.25■■■□□ 2.59
Trim41Q5NCC3 Gm28033-201ENSMUST00000184224 96 ntBASIC31.25■■■□□ 2.59
Trim41Q5NCC3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Trim41Q5NCC3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Trim41Q5NCC3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Trim41Q5NCC3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Trim41Q5NCC3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trim41Q5NCC3 Iqck-206ENSMUST00000208658 2891 ntBASIC31.24■■■□□ 2.59
Trim41Q5NCC3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Trim41Q5NCC3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trim41Q5NCC3 Gm3375-201ENSMUST00000203929 796 ntBASIC31.24■■■□□ 2.59
Trim41Q5NCC3 AC154471.1-201ENSMUST00000224418 436 ntBASIC31.24■■■□□ 2.59
Trim41Q5NCC3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trim41Q5NCC3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC31.24■■■□□ 2.59
Trim41Q5NCC3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trim41Q5NCC3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Trim41Q5NCC3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC31.23■■■□□ 2.59
Trim41Q5NCC3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Trim41Q5NCC3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Trim41Q5NCC3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC31.22■■■□□ 2.59
Trim41Q5NCC3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Trim41Q5NCC3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Trim41Q5NCC3 Mzt1-203ENSMUST00000227948 952 ntBASIC31.22■■■□□ 2.59
Trim41Q5NCC3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Trim41Q5NCC3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Trim41Q5NCC3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Trim41Q5NCC3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Trim41Q5NCC3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC31.2■■■□□ 2.59
Trim41Q5NCC3 Otx2os1-204ENSMUST00000227221 751 ntBASIC31.2■■■□□ 2.59
Trim41Q5NCC3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
Trim41Q5NCC3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC31.2■■■□□ 2.59
Trim41Q5NCC3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Trim41Q5NCC3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Trim41Q5NCC3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC31.2■■■□□ 2.58
Trim41Q5NCC3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC31.2■■■□□ 2.58
Trim41Q5NCC3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Trim41Q5NCC3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms