Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl5Q3UTQ8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl5Q3UTQ8 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl5Q3UTQ8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdkl5Q3UTQ8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdkl5Q3UTQ8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdkl5Q3UTQ8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdkl5Q3UTQ8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.83■□□□□ 0.92
Cdkl5Q3UTQ8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cdkl5Q3UTQ8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Flg-201ENSMUST00000050758 1488 ntBASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Gm38285-201ENSMUST00000192928 922 ntBASIC20.82■□□□□ 0.92
Cdkl5Q3UTQ8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms