Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhej1Q3KNJ2 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.19■□□□□ 0.66
Nhej1Q3KNJ2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nhej1Q3KNJ2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nhej1Q3KNJ2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nhej1Q3KNJ2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Nhej1Q3KNJ2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nhej1Q3KNJ2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nhej1Q3KNJ2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nhej1Q3KNJ2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nhej1Q3KNJ2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.18■□□□□ 0.66
Nhej1Q3KNJ2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nhej1Q3KNJ2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nhej1Q3KNJ2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhej1Q3KNJ2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Nhej1Q3KNJ2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nhej1Q3KNJ2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nhej1Q3KNJ2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nhej1Q3KNJ2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nhej1Q3KNJ2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nhej1Q3KNJ2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nhej1Q3KNJ2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nhej1Q3KNJ2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nhej1Q3KNJ2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms