Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.44□□□□□ -0.42
PrkdcP97313 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PrkdcP97313 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PrkdcP97313 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.43□□□□□ -0.42
PrkdcP97313 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.43□□□□□ -0.42
PrkdcP97313 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkdcP97313 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkdcP97313 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkdcP97313 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkdcP97313 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PrkdcP97313 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkdcP97313 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
PrkdcP97313 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
PrkdcP97313 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkdcP97313 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkdcP97313 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.42□□□□□ -0.42
PrkdcP97313 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.42□□□□□ -0.42
PrkdcP97313 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PrkdcP97313 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkdcP97313 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.41□□□□□ -0.42
PrkdcP97313 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.41□□□□□ -0.42
PrkdcP97313 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.41□□□□□ -0.42
PrkdcP97313 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkdcP97313 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.4□□□□□ -0.42
PrkdcP97313 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.4□□□□□ -0.42
PrkdcP97313 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.4□□□□□ -0.42
PrkdcP97313 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PrkdcP97313 Gm43575-201ENSMUST00000196420 516 ntBASIC12.4□□□□□ -0.42
PrkdcP97313 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PrkdcP97313 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
PrkdcP97313 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PrkdcP97313 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
PrkdcP97313 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PrkdcP97313 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PrkdcP97313 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PrkdcP97313 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
PrkdcP97313 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.39□□□□□ -0.43
PrkdcP97313 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.39□□□□□ -0.43
PrkdcP97313 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PrkdcP97313 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
PrkdcP97313 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
PrkdcP97313 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PrkdcP97313 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PrkdcP97313 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PrkdcP97313 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.38□□□□□ -0.43
PrkdcP97313 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.38□□□□□ -0.43
PrkdcP97313 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.38□□□□□ -0.43
PrkdcP97313 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.38□□□□□ -0.43
PrkdcP97313 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PrkdcP97313 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms