Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pfn1P62962 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.98□□□□□ -0.17
Pfn1P62962 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.98□□□□□ -0.17
Pfn1P62962 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pfn1P62962 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.97□□□□□ -0.17
Pfn1P62962 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.97□□□□□ -0.17
Pfn1P62962 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfn1P62962 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.96□□□□□ -0.17
Pfn1P62962 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pfn1P62962 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.96□□□□□ -0.17
Pfn1P62962 Rps24-207ENSMUST00000224568 714 ntBASIC13.96□□□□□ -0.17
Pfn1P62962 Golgb1-201ENSMUST00000023534 498 ntBASIC13.96□□□□□ -0.17
Pfn1P62962 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pfn1P62962 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Pfn1P62962 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Pfn1P62962 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfn1P62962 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pfn1P62962 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pfn1P62962 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.96□□□□□ -0.18
Pfn1P62962 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pfn1P62962 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Pfn1P62962 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Pfn1P62962 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.96□□□□□ -0.18
Pfn1P62962 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.95□□□□□ -0.18
Pfn1P62962 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.95□□□□□ -0.18
Pfn1P62962 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pfn1P62962 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfn1P62962 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.94□□□□□ -0.18
Pfn1P62962 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.94□□□□□ -0.18
Pfn1P62962 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.94□□□□□ -0.18
Pfn1P62962 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.94□□□□□ -0.18
Pfn1P62962 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Gm45102-201ENSMUST00000207427 857 ntBASIC13.94□□□□□ -0.18
Pfn1P62962 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pfn1P62962 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfn1P62962 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.93□□□□□ -0.18
Pfn1P62962 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfn1P62962 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfn1P62962 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pfn1P62962 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.93□□□□□ -0.18
Pfn1P62962 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfn1P62962 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Pfn1P62962 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.93□□□□□ -0.18
Pfn1P62962 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfn1P62962 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pfn1P62962 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.93□□□□□ -0.18
Pfn1P62962 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.93□□□□□ -0.18
Pfn1P62962 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms