Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rpl39P62892 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rpl39P62892 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Rpl39P62892 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rpl39P62892 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Rpl39P62892 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rpl39P62892 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Gm12922-201ENSMUST00000120626 809 ntBASIC12.84□□□□□ -0.35
Rpl39P62892 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.84□□□□□ -0.35
Rpl39P62892 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.84□□□□□ -0.35
Rpl39P62892 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.84□□□□□ -0.35
Rpl39P62892 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rpl39P62892 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl39P62892 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.84□□□□□ -0.35
Rpl39P62892 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpl39P62892 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpl39P62892 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Rpl39P62892 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpl39P62892 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Rpl39P62892 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Gm12251-201ENSMUST00000117893 792 ntBASIC12.83□□□□□ -0.36
Rpl39P62892 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Gm43137-201ENSMUST00000198052 594 ntBASIC12.83□□□□□ -0.36
Rpl39P62892 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rpl39P62892 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl39P62892 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rpl39P62892 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Gm11421-201ENSMUST00000122124 294 ntBASIC12.82□□□□□ -0.36
Rpl39P62892 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpl39P62892 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.82□□□□□ -0.36
Rpl39P62892 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpl39P62892 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.82□□□□□ -0.36
Rpl39P62892 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.82□□□□□ -0.36
Rpl39P62892 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Rpl39P62892 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rpl39P62892 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39P62892 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.81□□□□□ -0.36
Rpl39P62892 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rpl39P62892 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.81□□□□□ -0.36
Rpl39P62892 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.81□□□□□ -0.36
Rpl39P62892 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.81□□□□□ -0.36
Rpl39P62892 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Gm45102-201ENSMUST00000207427 857 ntBASIC12.81□□□□□ -0.36
Rpl39P62892 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms